BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B05LP1|AL430489
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1278 1626 0.0
>3x_Contig1278
Length = 6932
Score = 1626 bits (819), Expect = 0.0
Identities = 827/829 (99%), Gaps = 1/829 (0%)
Strand = Plus / Minus
Query: 1 taaaccagacgatgagaacggtcaggw-gccggtcaagatgcaagtaacagaattactgt 59
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4043 taaaccagacgatgagaacggtcaggacgccggtcaagatgcaagtaacagaattactgt 3984
Query: 60 ggtaccgacgaaattagcattaaagaaaaaaaagaatccacttggagtgaagctgaagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 ggtaccgacgaaattagcattaaagaaaaaaaagaatccacttggagtgaagctgaagag 3924
Query: 120 gaagaaggtatgacgcagtatgctattttgtttttgttaaccctttccttaaagtttgta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 gaagaaggtatgacgcagtatgctattttgtttttgttaaccctttccttaaagtttgta 3864
Query: 180 gccgcatgtaacgaagtacgatgatcacatgatcttcggcataagataataaacaacatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 gccgcatgtaacgaagtacgatgatcacatgatcttcggcataagataataaacaacatt 3804
Query: 240 aaaatcatggttatctttttgtagcattgaatgaatagactcgaataaaatctaccacct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 aaaatcatggttatctttttgtagcattgaatgaatagactcgaataaaatctaccacct 3744
Query: 300 aaaaccaataatatagttagcgatgtcttttccatacgaaagcgaggtcaaaacagaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3743 aaaaccaataatatagttagcgatgtcttttccatacgaaagcgaggtcaaaacagaaat 3684
Query: 360 tccaacacttcagaaagaagaattcaacgatgcaaccttcacctacatgaaatggccttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3683 tccaacacttcagaaagaagaattcaacgatgcaaccttcacctacatgaaatggccttc 3624
Query: 420 cagccttaagaagcacgagcgtaacactcacactaacaccactgatgtagaagacgaaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3623 cagccttaagaagcacgagcgtaacactcacactaacaccactgatgtagaagacgaaca 3564
Query: 480 agttattacaaagtgcagagttttgattgtacatggattctgtgaatactacaagattta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3563 agttattacaaagtgcagagttttgattgtacatggattctgtgaatactacaagattta 3504
Query: 540 ttacaaacttatggataatttagctttgaatggtgttgaaagttttatgttcgatcaaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3503 ttacaaacttatggataatttagctttgaatggtgttgaaagttttatgttcgatcaaag 3444
Query: 600 aggatctggtgatacctccccaggaaaggagagggggaaaaccgatgaagttgccacttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3443 aggatctggtgatacctccccaggaaaggagagggggaaaaccgatgaagttgccacttt 3384
Query: 660 tgctgatttaaaccatttcatcgagatgaacttgaaagagtgtgaacccgtagatcgcaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3383 tgctgatttaaaccatttcatcgagatgaacttgaaagagtgtgaacccgtagatcgcaa 3324
Query: 720 attgttcctttttggccattccatgggtggcggaatcgcattgaactacgggtgtaatgg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3323 attgttcctttttggccattccatgggtggcggaatcgcattgaactacgggtgtaatgg 3264
Query: 780 taagtacaaggataaaatcgcaggaatcattacgacaggccctttgatt 828
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 taagtacaaggataaaatcgcaggaatcattacgacaggccctttgatt 3215
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7224
Number of Sequences: 1807
Number of extensions: 7224
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)